itkImageFileCastWriter.h

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/*=========================================================================
 *
 *  Copyright UMC Utrecht and contributors
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *        http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkImageFileCastWriter_h
#define itkImageFileCastWriter_h
 
#include "itkImageFileWriter.h"
#include "itkImageIOBase.h"
#include "itkMacro.h"
#include "itkSize.h"
#include "itkImageIORegion.h"
#include "itkCastImageFilter.h"
#include "elxDefaultConstruct.h"
 
namespace itk
{

template <class TInputImage>
class ITK_TEMPLATE_EXPORT ImageFileCastWriter : public ImageFileWriter<TInputImage>
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(ImageFileCastWriter);

  using Self = ImageFileCastWriter;
  using Superclass = ImageFileWriter<TInputImage>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;

  itkNewMacro(Self);

  itkTypeMacro(ImageFileCastWriter, ImageFileWriter);

  using typename Superclass::InputImageType;
  using typename Superclass::InputImagePointer;
  using typename Superclass::InputImageRegionType;
  using typename Superclass::InputImagePixelType;
 
  itkStaticConstMacro(InputImageDimension, unsigned int, InputImageType::ImageDimension);

  itkSetStringMacro(OutputComponentType);
  itkGetStringMacro(OutputComponentType);
 
protected:
  ImageFileCastWriter() = default;
  ~ImageFileCastWriter() override = default;

  void
  GenerateData() override;
 
private:
  static std::string
  GetDefaultOutputComponentType();

  template <class OutputComponentType>
  void *
  ConvertScalarImage(const DataObject * inputImage)
  {
    using DiskImageType = Image<OutputComponentType, InputImageDimension>;
    using InputImageComponentType = typename PixelTraits<InputImagePixelType>::ValueType;
    using ScalarInputImageType = Image<InputImageComponentType, InputImageDimension>;

    this->GetModifiableImageIO()->SetPixelTypeInfo(static_cast<const OutputComponentType *>(nullptr));

    const auto caster = CastImageFilter<ScalarInputImageType, DiskImageType>::New();
    this->m_Caster = caster;
    const auto localInputImage = ScalarInputImageType::New();
 
    localInputImage->Graft(static_cast<const ScalarInputImageType *>(inputImage));
 
    caster->SetInput(localInputImage);
    caster->Update();

    return caster->GetOutput()->GetBufferPointer();
  }
 
 
  ProcessObject::Pointer m_Caster{ nullptr };
 
  std::string m_OutputComponentType{ Self::GetDefaultOutputComponentType() };
};

template <typename TImage>
void
WriteCastedImage(const TImage &      image,
                 const std::string & filename,
                 const std::string & outputComponentType,
                 bool                compress)
{
  elx::DefaultConstruct<ImageFileCastWriter<TImage>> writer;
  writer.SetInput(&image);
  writer.SetFileName(filename);
  writer.SetOutputComponentType(outputComponentType);
  writer.SetUseCompression(compress);
  writer.Update();
}
 
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkImageFileCastWriter.hxx"
#endif
 
#endif // itkImageFileCastWriter_h