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itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType > Class Template Reference

#include <itkDeformationFieldInterpolatingTransform.h>

Detailed Description

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
class itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >

Transform that interpolates a given deformation field.

A simple transform that allows the user to set a deformation field. TransformPoint adds the displacement to the input point. This transform does not support optimizers. Its Set/GetParameters is not implemented. DO NOT USE IT FOR REGISTRATION. You may set your own interpolator!

Definition at line 46 of file itkDeformationFieldInterpolatingTransform.h.

Inheritance diagram for itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >:

Public Types

using ConstPointer = SmartPointer<const Self>
using DefaultDeformationFieldInterpolatorType
using DeformationFieldComponentType = TComponentType
using DeformationFieldInterpolatorPointer = typename DeformationFieldInterpolatorType::Pointer
using DeformationFieldInterpolatorType = VectorInterpolateImageFunction<DeformationFieldType, ScalarType>
using DeformationFieldPointer = typename DeformationFieldType::Pointer
using DeformationFieldType = Image<DeformationFieldVectorType, Self::InputSpaceDimension>
using DeformationFieldVectorType = Vector<DeformationFieldComponentType, Self::OutputSpaceDimension>
using InternalMatrixType
using JacobianOfSpatialHessianType
using JacobianOfSpatialJacobianType
using NonZeroJacobianIndicesType
using Pointer = SmartPointer<Self>
using Self = DeformationFieldInterpolatingTransform
using SpatialHessianType
using SpatialJacobianType
using Superclass = AdvancedTransform<TScalarType, NDimensions, NDimensions>
Public Types inherited from itk::AdvancedTransform< double, 3, 3 >
using ConstPointer
using InternalMatrixType
using InverseTransformBaseType
using JacobianOfSpatialHessianType
using JacobianOfSpatialJacobianType
using MovingImageGradientType
using MovingImageGradientValueType
using NonZeroJacobianIndicesType
using Pointer
using Self
using SpatialHessianType
using SpatialJacobianType
using Superclass
using TransformType
using TransformTypeConstPointer
using TransformTypePointer

Public Member Functions

virtual const char * GetClassName () const
const ParametersType & GetFixedParameters () const override
void GetJacobian (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
void GetJacobianOfSpatialHessian (const InputPointType &, JacobianOfSpatialHessianType &, NonZeroJacobianIndicesType &) const override
void GetJacobianOfSpatialHessian (const InputPointType &, SpatialHessianType &, JacobianOfSpatialHessianType &, NonZeroJacobianIndicesType &) const override
void GetJacobianOfSpatialJacobian (const InputPointType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
void GetJacobianOfSpatialJacobian (const InputPointType &, SpatialJacobianType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
void GetSpatialHessian (const InputPointType &, SpatialHessianType &) const override
void GetSpatialJacobian (const InputPointType &, SpatialJacobianType &) const override
bool IsLinear () const override
 ITK_DISALLOW_COPY_AND_MOVE (DeformationFieldInterpolatingTransform)
 itkGetModifiableObjectMacro (DeformationField, DeformationFieldType)
 itkGetModifiableObjectMacro (DeformationFieldInterpolator, DeformationFieldInterpolatorType)
 itkStaticConstMacro (InputSpaceDimension, unsigned int, Superclass::InputSpaceDimension)
 itkStaticConstMacro (OutputSpaceDimension, unsigned int, Superclass::OutputSpaceDimension)
virtual void SetDeformationField (DeformationFieldType *_arg)
virtual void SetDeformationFieldInterpolator (DeformationFieldInterpolatorType *_arg)
void SetFixedParameters (const ParametersType &) override
void SetIdentity ()
void SetParameters (const ParametersType &) override
OutputCovariantVectorType TransformCovariantVector (const InputCovariantVectorType &) const override
OutputPointType TransformPoint (const InputPointType &point) const override
OutputVectorType TransformVector (const InputVectorType &) const override
OutputVnlVectorType TransformVector (const InputVnlVectorType &) const override
Public Member Functions inherited from itk::AdvancedTransform< double, 3, 3 >
void ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override
virtual void EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
virtual bool GetHasNonZeroJacobianOfSpatialHessian () const
virtual bool GetHasNonZeroSpatialHessian () const
virtual NumberOfParametersType GetNumberOfNonZeroJacobianIndices () const
 ITK_DISALLOW_COPY_AND_MOVE (AdvancedTransform)
 itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)

Static Public Member Functions

static Pointer New ()

Protected Types

using InputContinuousIndexType = typename DeformationFieldInterpolatorType::ContinuousIndexType
using InterpolatorOutputType = typename DeformationFieldInterpolatorType::OutputType

Protected Member Functions

 DeformationFieldInterpolatingTransform ()
void PrintSelf (std::ostream &os, Indent indent) const override
 ~DeformationFieldInterpolatingTransform () override=default
Protected Member Functions inherited from itk::AdvancedTransform< double, 3, 3 >
 AdvancedTransform ()=default
 ~AdvancedTransform () override=default

Protected Attributes

DeformationFieldPointer m_DeformationField {}
DeformationFieldInterpolatorPointer m_DeformationFieldInterpolator {}
DeformationFieldPointer m_ZeroDeformationField {}
Protected Attributes inherited from itk::AdvancedTransform< double, 3, 3 >
bool m_HasNonZeroJacobianOfSpatialHessian
bool m_HasNonZeroSpatialHessian

Member Typedef Documentation

◆ ConstPointer

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::ConstPointer = SmartPointer<const Self>

Definition at line 56 of file itkDeformationFieldInterpolatingTransform.h.

◆ DefaultDeformationFieldInterpolatorType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DefaultDeformationFieldInterpolatorType
Initial value:
VectorNearestNeighborInterpolateImageFunction<DeformationFieldType, ScalarType>

Definition at line 96 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldComponentType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldComponentType = TComponentType

Definition at line 89 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldInterpolatorPointer

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldInterpolatorPointer = typename DeformationFieldInterpolatorType::Pointer

Definition at line 95 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldInterpolatorType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldInterpolatorType = VectorInterpolateImageFunction<DeformationFieldType, ScalarType>

Definition at line 94 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldPointer

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldPointer = typename DeformationFieldType::Pointer

Definition at line 92 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldType = Image<DeformationFieldVectorType, Self::InputSpaceDimension>

Definition at line 91 of file itkDeformationFieldInterpolatingTransform.h.

◆ DeformationFieldVectorType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldVectorType = Vector<DeformationFieldComponentType, Self::OutputSpaceDimension>

Definition at line 90 of file itkDeformationFieldInterpolatingTransform.h.

◆ InputContinuousIndexType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::InputContinuousIndexType = typename DeformationFieldInterpolatorType::ContinuousIndexType
protected

Typedef which is used internally

Definition at line 248 of file itkDeformationFieldInterpolatingTransform.h.

◆ InternalMatrixType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::InternalMatrixType

Definition at line 140 of file itkAdvancedTransform.h.

◆ InterpolatorOutputType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::InterpolatorOutputType = typename DeformationFieldInterpolatorType::OutputType
protected

Definition at line 249 of file itkDeformationFieldInterpolatingTransform.h.

◆ JacobianOfSpatialHessianType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::JacobianOfSpatialHessianType

Definition at line 139 of file itkAdvancedTransform.h.

◆ JacobianOfSpatialJacobianType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::JacobianOfSpatialJacobianType

Definition at line 135 of file itkAdvancedTransform.h.

◆ NonZeroJacobianIndicesType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::NonZeroJacobianIndicesType

Types for the (Spatial)Jacobian/Hessian. Using an itk::FixedArray instead of an std::vector gives a performance gain for the SpatialHessianType.

Definition at line 133 of file itkAdvancedTransform.h.

◆ Pointer

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::Pointer = SmartPointer<Self>

Definition at line 55 of file itkDeformationFieldInterpolatingTransform.h.

◆ Self

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::Self = DeformationFieldInterpolatingTransform

Standard class typedefs.

Definition at line 53 of file itkDeformationFieldInterpolatingTransform.h.

◆ SpatialHessianType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::SpatialHessianType

Definition at line 137 of file itkAdvancedTransform.h.

◆ SpatialJacobianType

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >::SpatialJacobianType

Definition at line 134 of file itkAdvancedTransform.h.

◆ Superclass

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
using itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::Superclass = AdvancedTransform<TScalarType, NDimensions, NDimensions>

Definition at line 54 of file itkDeformationFieldInterpolatingTransform.h.

Constructor & Destructor Documentation

◆ DeformationFieldInterpolatingTransform()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::DeformationFieldInterpolatingTransform ( )
protected

◆ ~DeformationFieldInterpolatingTransform()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::~DeformationFieldInterpolatingTransform ( )
overrideprotecteddefault

Member Function Documentation

◆ GetClassName()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
virtual const char * itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetClassName ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedTransform< double, 3, 3 >.

◆ GetFixedParameters()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
const ParametersType & itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetFixedParameters ( ) const
inlineoverride

Get the Fixed Parameters.

Definition at line 122 of file itkDeformationFieldInterpolatingTransform.h.

◆ GetJacobian()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetJacobian ( const InputPointType & ,
JacobianType & ,
NonZeroJacobianIndicesType &  ) const
inlineoverridevirtual

Must be provided.

Implements itk::AdvancedTransform< double, 3, 3 >.

Definition at line 185 of file itkDeformationFieldInterpolatingTransform.h.

◆ GetJacobianOfSpatialHessian() [1/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetJacobianOfSpatialHessian ( const InputPointType & ,
JacobianOfSpatialHessianType & ,
NonZeroJacobianIndicesType &  ) const
inlineoverridevirtual

◆ GetJacobianOfSpatialHessian() [2/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetJacobianOfSpatialHessian ( const InputPointType & ,
SpatialHessianType & ,
JacobianOfSpatialHessianType & ,
NonZeroJacobianIndicesType &  ) const
inlineoverride

Definition at line 234 of file itkDeformationFieldInterpolatingTransform.h.

◆ GetJacobianOfSpatialJacobian() [1/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetJacobianOfSpatialJacobian ( const InputPointType & ,
JacobianOfSpatialJacobianType & ,
NonZeroJacobianIndicesType &  ) const
inlineoverridevirtual

◆ GetJacobianOfSpatialJacobian() [2/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetJacobianOfSpatialJacobian ( const InputPointType & ,
SpatialJacobianType & ,
JacobianOfSpatialJacobianType & ,
NonZeroJacobianIndicesType &  ) const
inlineoverride

Definition at line 215 of file itkDeformationFieldInterpolatingTransform.h.

◆ GetSpatialHessian()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetSpatialHessian ( const InputPointType & ,
SpatialHessianType &  ) const
inlineoverridevirtual

◆ GetSpatialJacobian()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::GetSpatialJacobian ( const InputPointType & ,
SpatialJacobianType &  ) const
inlineoverridevirtual

◆ IsLinear()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
bool itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::IsLinear ( ) const
inlineoverride

Definition at line 178 of file itkDeformationFieldInterpolatingTransform.h.

◆ ITK_DISALLOW_COPY_AND_MOVE()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::ITK_DISALLOW_COPY_AND_MOVE ( DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType > )

◆ itkGetModifiableObjectMacro() [1/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::itkGetModifiableObjectMacro ( DeformationField ,
DeformationFieldType  )

◆ itkGetModifiableObjectMacro() [2/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::itkGetModifiableObjectMacro ( DeformationFieldInterpolator ,
DeformationFieldInterpolatorType  )

◆ itkStaticConstMacro() [1/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::itkStaticConstMacro ( InputSpaceDimension ,
unsigned int ,
Superclass::InputSpaceDimension  )

Dimension of the domain spaces.

◆ itkStaticConstMacro() [2/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::itkStaticConstMacro ( OutputSpaceDimension ,
unsigned int ,
Superclass::OutputSpaceDimension  )

◆ New()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
Pointer itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::New ( )
static

New macro for creation of through the object factory.

◆ PrintSelf()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::PrintSelf ( std::ostream & os,
Indent indent ) const
overrideprotected

◆ SetDeformationField()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
virtual void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::SetDeformationField ( DeformationFieldType * _arg)
virtual

Set/Get the deformation field that defines the displacements

◆ SetDeformationFieldInterpolator()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
virtual void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::SetDeformationFieldInterpolator ( DeformationFieldInterpolatorType * _arg)
virtual

Set/Get the deformation field interpolator

◆ SetFixedParameters()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::SetFixedParameters ( const ParametersType & )
inlineoverride

Set the fixed parameters.

Definition at line 114 of file itkDeformationFieldInterpolatingTransform.h.

◆ SetIdentity()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::SetIdentity ( )

Make this an identity transform ( the deformation field is replaced by a zero deformation field

◆ SetParameters()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
void itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::SetParameters ( const ParametersType & )
inlineoverride

Set the transformation parameters is not supported. Use SetDeformationField() instead

Definition at line 103 of file itkDeformationFieldInterpolatingTransform.h.

◆ TransformCovariantVector()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
OutputCovariantVectorType itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::TransformCovariantVector ( const InputCovariantVectorType & ) const
inlineoverride

Definition at line 153 of file itkDeformationFieldInterpolatingTransform.h.

◆ TransformPoint()

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
OutputPointType itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::TransformPoint ( const InputPointType & point) const
override

Transform a point. This method adds a displacement to a given point, returning the transformed point.

◆ TransformVector() [1/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
OutputVectorType itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::TransformVector ( const InputVectorType & ) const
inlineoverride

These vector transforms are not implemented for this transform.

Definition at line 137 of file itkDeformationFieldInterpolatingTransform.h.

◆ TransformVector() [2/2]

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
OutputVnlVectorType itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::TransformVector ( const InputVnlVectorType & ) const
inlineoverride

Definition at line 145 of file itkDeformationFieldInterpolatingTransform.h.

Field Documentation

◆ m_DeformationField

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
DeformationFieldPointer itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::m_DeformationField {}
protected

Definition at line 255 of file itkDeformationFieldInterpolatingTransform.h.

◆ m_DeformationFieldInterpolator

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
DeformationFieldInterpolatorPointer itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::m_DeformationFieldInterpolator {}
protected

Definition at line 257 of file itkDeformationFieldInterpolatingTransform.h.

◆ m_ZeroDeformationField

template<class TScalarType = double, unsigned int NDimensions = 3, class TComponentType = double>
DeformationFieldPointer itk::DeformationFieldInterpolatingTransform< TScalarType, NDimensions, TComponentType >::m_ZeroDeformationField {}
protected

Definition at line 256 of file itkDeformationFieldInterpolatingTransform.h.



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